Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_102257 | Not Available | Negative | 895887 - 896291 | 14218.0 |
| hypothetical protein | SAMN04487898_102258 | Not Available | Positive | 896844 - 897179 | 12046.8 |
| methionine adenosyltransferase | SAMN04487898_102259 | Not Available | Negative | 897035 - 898285 | 45996.6 |
| hypothetical protein | SAMN04487898_102260 | Not Available | Negative | 898319 - 899932 | 61867.4 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04487898_102261 | Not Available | Negative | 899932 - 901887 | 73446.0 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04487898_102262 | Not Available | Negative | 901985 - 902581 | 22833.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04487898_102263 | Not Available | Negative | 902581 - 903789 | 44633.1 |
| acetyltransferase (gnat) family protein | SAMN04487898_102264 | Not Available | Negative | 903789 - 904385 | 22525.4 |
| glycosyl transferases group 1 | SAMN04487898_102265 | Not Available | Negative | 904378 - 905586 | 44992.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_102266 | Not Available | Negative | 905594 - 906718 | 42428.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

