Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative colanic acid biosynthesis acetyltransferase wcaf | SAMN04487898_102247 | Not Available | Positive | 884300 - 884854 | 20120.8 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN04487898_102248 | Not Available | Positive | 884851 - 885966 | 40519.8 |
| hypothetical protein | SAMN04487898_102249 | Not Available | Positive | 886058 - 887281 | 47315.9 |
| methyltransferase, fkbm family | SAMN04487898_102250 | Not Available | Positive | 887372 - 888079 | 26901.5 |
| hypothetical protein | SAMN04487898_102251 | Not Available | Negative | 888066 - 888386 | 12087.8 |
| helix-turn-helix | SAMN04487898_102252 | Not Available | Negative | 888632 - 888883 | 9479.61 |
| hypothetical protein | SAMN04487898_102253 | Not Available | Positive | 889392 - 889556 | 6191.49 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102254 | Not Available | Positive | 889642 - 892839 | 117801.0 |
| susd family protein | SAMN04487898_102255 | Not Available | Positive | 892861 - 894249 | 52318.2 |
| cytochrome oxidase cu insertion factor, sco1/senc/prrc family | SAMN04487898_102256 | Not Available | Positive | 894316 - 895842 | 58588.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

