Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN04487898_102227 | Not Available | Negative | 861205 - 863325 | 76764.5 |
| l-rhamnose-h+ transport protein | SAMN04487898_102228 | Not Available | Negative | 863350 - 864429 | 39288.6 |
| tyrosine-protein phosphatase ywqe | SAMN04487898_102229 | Not Available | Negative | 864502 - 865227 | 27626.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_102230 | Not Available | Negative | 865238 - 865987 | 28377.2 |
| polysaccharide export outer membrane protein | SAMN04487898_102231 | Not Available | Positive | 866084 - 866857 | 28573.1 |
| capsular exopolysaccharide family | SAMN04487898_102232 | Not Available | Positive | 866857 - 869256 | 89948.2 |
| transcription antitermination factor nusg | SAMN04487898_102233 | Not Available | Positive | 869235 - 869747 | 19664.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_102234 | Not Available | Positive | 869867 - 870997 | 42878.3 |
| lipopolysaccharide transport system permease protein | SAMN04487898_102235 | Not Available | Positive | 870981 - 871844 | 32957.1 |
| abc transporter | SAMN04487898_102236 | Not Available | Positive | 871868 - 873115 | 45771.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

