Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN04487898_102207 | Not Available | Negative | 838309 - 839625 | 48388.3 |
| protein of unknown function | SAMN04487898_102208 | Not Available | Negative | 839648 - 840442 | 29476.7 |
| tpr repeat-containing protein | SAMN04487898_102209 | Not Available | Negative | 840420 - 841469 | 39567.6 |
| dutp pyrophosphatase | SAMN04487898_102210 | Not Available | Negative | 841470 - 841901 | 15611.7 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04487898_102211 | Not Available | Negative | 841898 - 843382 | 56647.9 |
| acylphosphatase | SAMN04487898_102212 | Not Available | Negative | 843383 - 843661 | 10470.6 |
| enoyl-[acyl-carrier protein] reductase ii | SAMN04487898_102213 | Not Available | Negative | 843670 - 844617 | 33630.4 |
| cytosine/adenosine deaminase | SAMN04487898_102214 | Not Available | Negative | 844636 - 845814 | 43739.6 |
| hth domain-containing protein | SAMN04487898_102215 | Not Available | Positive | 845940 - 846632 | 27018.7 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04487898_102216 | Not Available | Positive | 846739 - 847233 | 19041.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

