Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein a | SAMN04487898_102197 | Not Available | Negative | 823279 - 823494 | 7751.75 |
| hypothetical protein | SAMN04487898_102198 | Not Available | Negative | 823798 - 824202 | 15370.1 |
| glycine cleavage system h protein | SAMN04487898_102199 | Not Available | Negative | 824206 - 824586 | 13658.0 |
| cell surface protein spra | SAMN04487898_102200 | Not Available | Negative | 824687 - 831829 | 268640.0 |
| holliday junction dna helicase subunit ruva | SAMN04487898_102201 | Not Available | Negative | 831881 - 832465 | 21140.8 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN04487898_102202 | Not Available | Negative | 832468 - 834783 | 84793.3 |
| membrane-bound lytic murein transglycosylase d | SAMN04487898_102203 | Not Available | Negative | 834858 - 836081 | 46093.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN04487898_102204 | Not Available | Negative | 836149 - 837603 | 52774.8 |
| sec-independent protein translocase protein tata | SAMN04487898_102205 | Not Available | Negative | 837645 - 837851 | 7184.84 |
| mtta/hcf106 family protein | SAMN04487898_102206 | Not Available | Negative | 837862 - 838254 | 14627.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

