Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase c | SAMN04487898_102187 | Not Available | Negative | 809072 - 811618 | 94728.9 |
| hypothetical protein | SAMN04487898_102188 | Not Available | Negative | 811721 - 812542 | 30059.5 |
| rhamnogalacturonyl hydrolase yesr | SAMN04487898_102189 | Not Available | Positive | 812772 - 813968 | 45429.6 |
| glucose / sorbosone dehydrogenase | SAMN04487898_102190 | Not Available | Positive | 814055 - 815338 | 47139.2 |
| cytochrome c, mono-and diheme variants | SAMN04487898_102191 | Not Available | Positive | 815348 - 815797 | 15885.6 |
| rhamnogalacturonyl hydrolase yesr | SAMN04487898_102192 | Not Available | Positive | 815800 - 817020 | 45820.7 |
| l-lactate dehydrogenase complex protein lldf | SAMN04487898_102193 | Not Available | Positive | 817160 - 818548 | 52222.1 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04487898_102194 | Not Available | Positive | 818551 - 820527 | 73640.1 |
| hypothetical protein | SAMN04487898_102195 | Not Available | Negative | 820524 - 821144 | 23805.9 |
| ferrous iron transport protein b | SAMN04487898_102196 | Not Available | Negative | 821157 - 823274 | 78495.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

