Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN04487898_102167 | Not Available | Positive | 791717 - 792316 | 22673.1 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN04487898_102168 | Not Available | Positive | 792389 - 792652 | 10358.4 |
| gdsl-like lipase/acylhydrolase | SAMN04487898_102169 | Not Available | Negative | 792731 - 794020 | 44991.8 |
| long-chain fatty acid transport protein | SAMN04487898_102170 | Not Available | Negative | 794039 - 795322 | 45954.1 |
| hypothetical protein | SAMN04487898_102171 | Not Available | Positive | 795358 - 795480 | 4554.41 |
| nitroreductase | SAMN04487898_102172 | Not Available | Positive | 795507 - 796139 | 23334.8 |
| hypothetical protein | SAMN04487898_102173 | Not Available | Positive | 796313 - 799039 | 100882.0 |
| phage shock protein c (pspc) family protein | SAMN04487898_102174 | Not Available | Negative | 799102 - 800643 | 58414.4 |
| padr family transcriptional regulator, regulatory protein padr | SAMN04487898_102175 | Not Available | Negative | 800640 - 801008 | 13800.7 |
| hypothetical protein | SAMN04487898_102176 | Not Available | Negative | 801414 - 802556 | 41761.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

