Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized osmc-related protein | SAMN04487898_102137 | Not Available | Negative | 756550 - 756954 | 14676.4 |
| lipoic acid synthetase | SAMN04487898_102138 | Not Available | Positive | 757084 - 757962 | 32950.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_102139 | Not Available | Positive | 758018 - 758569 | 20973.4 |
| anti-sigma-k factor rska | SAMN04487898_102140 | Not Available | Positive | 758571 - 759428 | 31597.4 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related | SAMN04487898_102141 | Not Available | Negative | 759433 - 760365 | 33213.6 |
| excinuclease abc subunit a | SAMN04487898_102142 | Not Available | Negative | 760376 - 763219 | 106041.0 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN04487898_102143 | Not Available | Negative | 763325 - 764377 | 39729.1 |
| transglycosylase slt domain-containing protein | SAMN04487898_102144 | Not Available | Negative | 764472 - 765263 | 29869.2 |
| 23s rrna pseudouridine2605 synthase | SAMN04487898_102145 | Not Available | Positive | 765999 - 767591 | 60146.2 |
| 6-phosphogluconolactonase | SAMN04487898_102146 | Not Available | Positive | 767599 - 768717 | 40681.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

