Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN04487898_10123 | Not Available | Positive | 36179 - 37144 | 35713.8 |
| hypothetical protein | SAMN04487898_10124 | Not Available | Negative | 37119 - 37529 | 15798.9 |
| hypothetical protein | SAMN04487898_10125 | Not Available | Positive | 37671 - 38045 | 14160.6 |
| ytka-like | SAMN04487898_10126 | Not Available | Positive | 38164 - 38982 | 30298.5 |
| iron complex outermembrane recepter protein | SAMN04487898_10127 | Not Available | Positive | 38987 - 41008 | 76008.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_10128 | Not Available | Positive | 41031 - 41627 | 22557.5 |
| azurin | SAMN04487898_10129 | Not Available | Positive | 41719 - 42246 | 18798.6 |
| nitric oxide reductase subunit b | SAMN04487898_10130 | Not Available | Positive | 42268 - 44517 | 85257.0 |
| pyruvate formate lyase activating enzyme | SAMN04487898_10131 | Not Available | Positive | 44550 - 45230 | 25737.6 |
| uncharacterized conserved protein | SAMN04487898_10132 | Not Available | Positive | 45242 - 46057 | 31087.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

