Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 2, sugar binding domain | SAMN04487898_102117 | Not Available | Negative | 733321 - 736401 | 114724.0 |
| alpha-l-rhamnosidase | SAMN04487898_102118 | Not Available | Negative | 736370 - 739084 | 101209.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN04487898_102119 | Not Available | Negative | 739351 - 740355 | 35691.2 |
| phosphoesterase recj domain-containing protein | SAMN04487898_102120 | Not Available | Negative | 740420 - 741430 | 37707.0 |
| nucleoside diphosphate kinase | SAMN04487898_102121 | Not Available | Positive | 741573 - 741992 | 15036.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | SAMN04487898_102122 | Not Available | Positive | 742116 - 742847 | 26402.0 |
| hypothetical protein | SAMN04487898_102123 | Not Available | Positive | 742908 - 743081 | 6242.16 |
| protein of unknown function | SAMN04487898_102124 | Not Available | Negative | 743089 - 743379 | 10800.5 |
| dna replication and repair protein recf | SAMN04487898_102125 | Not Available | Negative | 743372 - 744475 | 42729.6 |
| tpr repeat-containing protein | SAMN04487898_102126 | Not Available | Positive | 744680 - 745351 | 24778.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

