Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_102107 | Not Available | Negative | 719209 - 719697 | 18102.4 |
| hypothetical protein | SAMN04487898_102108 | Not Available | Negative | 719870 - 721450 | 56573.2 |
| starch-binding associating with outer membrane | SAMN04487898_102109 | Not Available | Negative | 721478 - 723049 | 58100.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102110 | Not Available | Negative | 723061 - 726306 | 118121.0 |
| glycerol-3-phosphate dehydrogenase | SAMN04487898_102111 | Not Available | Negative | 726429 - 728042 | 58467.0 |
| transcriptional regulator, deor family | SAMN04487898_102112 | Not Available | Positive | 728243 - 729007 | 27587.3 |
| octaprenyl-diphosphate synthase | SAMN04487898_102113 | Not Available | Negative | 729020 - 729991 | 36216.0 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04487898_102114 | Not Available | Negative | 729996 - 731411 | 51501.9 |
| l-asparaginase | SAMN04487898_102115 | Not Available | Negative | 731481 - 732497 | 37794.7 |
| tatd dnase family protein | SAMN04487898_102116 | Not Available | Negative | 732500 - 733267 | 29049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

