Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10297 | Not Available | Negative | 706005 - 706808 | 28912.5 |
| protein of unknown function | SAMN04487898_10298 | Not Available | Negative | 706789 - 707286 | 18180.0 |
| susd family protein | SAMN04487898_10299 | Not Available | Negative | 707311 - 708687 | 50816.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_102100 | Not Available | Negative | 708712 - 711768 | 111554.0 |
| transcriptional regulator, laci family | SAMN04487898_102101 | Not Available | Negative | 712243 - 713256 | 38408.1 |
| linoleoyl-coa desaturase | SAMN04487898_102102 | Not Available | Positive | 713403 - 714554 | 44115.6 |
| lysophospholipase l1 | SAMN04487898_102103 | Not Available | Negative | 714570 - 715262 | 25927.5 |
| mfs transporter, opa family, glycerol-3-phosphate transporter | SAMN04487898_102104 | Not Available | Negative | 715300 - 716640 | 49635.3 |
| glycerophosphoryl diester phosphodiesterase | SAMN04487898_102105 | Not Available | Negative | 716722 - 717624 | 33599.9 |
| calcineurin-like phosphoesterase | SAMN04487898_102106 | Not Available | Negative | 717720 - 719105 | 52271.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

