Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04487898_13036 | Not Available | Negative | 6702520 - 6704091 | 58585.3 |
| glucose/galactose transporter | SAMN04487898_13037 | Not Available | Negative | 6704285 - 6705568 | 46128.7 |
| transketolase | SAMN04487898_13038 | Not Available | Positive | 6705990 - 6706835 | 30652.6 |
| transposase domain | SAMN04487898_1311 | Not Available | Negative | 6706942 - 6707201 | 9739.87 |
| solute:na+ symporter, sss family | SAMN04487898_1312 | Not Available | Negative | 6707287 - 6708972 | 60722.2 |
| cytochrome c551/c552 | SAMN04487898_1313 | Not Available | Negative | 6709038 - 6710996 | 72768.1 |
| protein of unknown function | SAMN04487898_1314 | Not Available | Negative | 6711014 - 6712450 | 52260.1 |
| predicted arabinose efflux permease, mfs family | SAMN04487898_1315 | Not Available | Negative | 6712638 - 6713735 | 39509.4 |
| thioredoxin-like | SAMN04487898_1316 | Not Available | Negative | 6714034 - 6714612 | 20926.3 |
| hypothetical protein | SAMN04487898_1317 | Not Available | Positive | 6714802 - 6715656 | 32026.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

