Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10277 | Not Available | Negative | 677805 - 678551 | 28208.3 |
| transcriptional regulator, spx/mgsr family | SAMN04487898_10278 | Not Available | Negative | 678618 - 678965 | 13275.0 |
| histidine kinase | SAMN04487898_10279 | Not Available | Positive | 679092 - 680564 | 55621.3 |
| two component transcriptional regulator, lyttr family | SAMN04487898_10280 | Not Available | Positive | 680574 - 681260 | 25989.5 |
| signal transduction histidine kinase | SAMN04487898_10281 | Not Available | Positive | 681359 - 684841 | 130378.0 |
| chemotaxis protein methyltransferase cher | SAMN04487898_10282 | Not Available | Positive | 684843 - 685667 | 31943.9 |
| signal transduction histidine kinase | SAMN04487898_10283 | Not Available | Positive | 685699 - 687291 | 59487.4 |
| peptidyl-trna hydrolase, pth1 family | SAMN04487898_10284 | Not Available | Negative | 687281 - 687841 | 20649.1 |
| large subunit ribosomal protein l25 | SAMN04487898_10285 | Not Available | Negative | 687925 - 688503 | 21367.4 |
| ribose-phosphate pyrophosphokinase | SAMN04487898_10286 | Not Available | Negative | 688531 - 689472 | 34196.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

