Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN04487898_13026 | Not Available | Negative | 6690740 - 6691471 | 27582.4 |
| gtp-binding protein | SAMN04487898_13027 | Not Available | Positive | 6691524 - 6692153 | 23901.0 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04487898_13028 | Not Available | Positive | 6692168 - 6693034 | 32262.0 |
| oligoendopeptidase f | SAMN04487898_13029 | Not Available | Positive | 6693040 - 6694755 | 66592.2 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04487898_13030 | Not Available | Positive | 6694760 - 6696715 | 71667.6 |
| kup system potassium uptake protein | SAMN04487898_13031 | Not Available | Negative | 6696948 - 6698900 | 72618.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04487898_13032 | Not Available | Positive | 6699122 - 6699637 | 19158.6 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04487898_13033 | Not Available | Positive | 6699743 - 6700354 | 23038.6 |
| peptidase family m23 | SAMN04487898_13034 | Not Available | Positive | 6700360 - 6702084 | 64251.6 |
| peroxiredoxin q/bcp | SAMN04487898_13035 | Not Available | Positive | 6702090 - 6702551 | 17014.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

