Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic chaperone for outer membrane proteins skp | SAMN04487898_13016 | Not Available | Negative | 6681372 - 6681902 | 20477.8 |
| beta-barrel assembly machine subunit bama | SAMN04487898_13017 | Not Available | Negative | 6682040 - 6684607 | 95690.8 |
| undecaprenyl diphosphate synthase | SAMN04487898_13018 | Not Available | Negative | 6684671 - 6685411 | 28359.9 |
| hypothetical protein | SAMN04487898_13019 | Not Available | Negative | 6685431 - 6686228 | 30326.6 |
| nad+ kinase | SAMN04487898_13020 | Not Available | Negative | 6686230 - 6687111 | 32967.8 |
| cbs domain-containing protein | SAMN04487898_13021 | Not Available | Negative | 6687151 - 6687813 | 24505.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487898_13022 | Not Available | Negative | 6687814 - 6688578 | 28846.1 |
| hypothetical protein | SAMN04487898_13023 | Not Available | Negative | 6688694 - 6689140 | 16283.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04487898_13024 | Not Available | Negative | 6689152 - 6689907 | 27557.5 |
| probable protein-translocating porin port | SAMN04487898_13025 | Not Available | Negative | 6690016 - 6690750 | 27833.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

