Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component regulator propeller | SAMN04487898_1306 | Not Available | Negative | 6663970 - 6668391 | 165963.0 |
| protein of unknown function | SAMN04487898_1307 | Not Available | Negative | 6668392 - 6671817 | 127026.0 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04487898_1308 | Not Available | Negative | 6672232 - 6673398 | 44778.8 |
| hypothetical protein | SAMN04487898_1309 | Not Available | Negative | 6673395 - 6674621 | 45979.2 |
| gmp synthase (glutamine-hydrolysing) | SAMN04487898_13010 | Not Available | Negative | 6674578 - 6676104 | 56312.6 |
| dcmp deaminase | SAMN04487898_13011 | Not Available | Negative | 6676152 - 6676625 | 17147.5 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04487898_13012 | Not Available | Positive | 6676747 - 6677376 | 23588.8 |
| amidophosphoribosyltransferase | SAMN04487898_13013 | Not Available | Negative | 6677716 - 6679617 | 71937.1 |
| glutamate racemase | SAMN04487898_13014 | Not Available | Negative | 6679872 - 6680702 | 30829.9 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04487898_13015 | Not Available | Negative | 6680768 - 6681328 | 20423.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

