Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_12911 | Not Available | Negative | 6610652 - 6611383 | 28536.8 |
| hypothetical protein | SAMN04487898_12912 | Not Available | Positive | 6611843 - 6612220 | 14718.6 |
| carboxypepd_reg-like domain-containing protein | SAMN04487898_12913 | Not Available | Negative | 6612574 - 6615030 | 92478.0 |
| hypothetical protein | SAMN04487898_12914 | Not Available | Negative | 6615246 - 6616235 | 36676.2 |
| hypothetical protein | SAMN04487898_12915 | Not Available | Negative | 6616248 - 6616376 | 4391.07 |
| hypothetical protein | SAMN04487898_12916 | Not Available | Positive | 6616647 - 6616796 | 5614.97 |
| pyruvate dehydrogenase (quinone) | SAMN04487898_12917 | Not Available | Positive | 6616890 - 6618611 | 62221.7 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04487898_12918 | Not Available | Positive | 6618614 - 6619729 | 40994.9 |
| protein of unknown function | SAMN04487898_12919 | Not Available | Positive | 6619757 - 6619990 | 9185.7 |
| nadh:flavin oxidoreductase / nadh oxidase family protein | SAMN04487898_12920 | Not Available | Positive | 6620001 - 6620528 | 18945.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

