Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase | SAMN04487898_12845 | Not Available | Positive | 6592021 - 6592680 | 25003.5 |
| mscs family membrane protein | SAMN04487898_12846 | Not Available | Negative | 6592754 - 6593866 | 41836.5 |
| glutamate dehydrogenase/leucine dehydrogenase | SAMN04487898_12847 | Not Available | Negative | 6593869 - 6595095 | 45188.2 |
| large subunit ribosomal protein l19 | SAMN04487898_12848 | Not Available | Negative | 6595185 - 6595532 | 13077.0 |
| hypothetical protein | SAMN04487898_12849 | Not Available | Negative | 6595811 - 6596083 | 10660.2 |
| hypothetical protein | SAMN04487898_12850 | Not Available | Negative | 6596111 - 6596392 | 11127.0 |
| trna (guanine37-n1)-methyltransferase | SAMN04487898_12851 | Not Available | Negative | 6596617 - 6597294 | 24994.9 |
| 16s rrna processing protein rimm | SAMN04487898_12852 | Not Available | Negative | 6597309 - 6597836 | 20226.9 |
| small subunit ribosomal protein s16 | SAMN04487898_12853 | Not Available | Negative | 6597912 - 6598511 | 21567.3 |
| 5'(3')-deoxyribonucleotidase | SAMN04487898_12854 | Not Available | Positive | 6598673 - 6599191 | 20132.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

