Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone htpg | SAMN04487898_12835 | Not Available | Negative | 6580992 - 6582881 | 71092.6 |
| predicted membrane protein | SAMN04487898_12836 | Not Available | Positive | 6583033 - 6584016 | 37866.2 |
| hypothetical protein | SAMN04487898_12837 | Not Available | Positive | 6584013 - 6585200 | 44510.0 |
| predicted zn-dependent peptidase | SAMN04487898_12838 | Not Available | Positive | 6585243 - 6586472 | 45876.0 |
| peptide deformylase | SAMN04487898_12839 | Not Available | Positive | 6586491 - 6587051 | 21544.1 |
| hypothetical protein | SAMN04487898_12840 | Not Available | Negative | 6587048 - 6587668 | 23162.9 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN04487898_12841 | Not Available | Negative | 6587744 - 6587989 | 8747.89 |
| atp-binding protein involved in chromosome partitioning | SAMN04487898_12842 | Not Available | Negative | 6588038 - 6589132 | 39031.5 |
| transglycosylase | SAMN04487898_12843 | Not Available | Positive | 6589252 - 6591399 | 80960.2 |
| hypoxanthine phosphoribosyltransferase | SAMN04487898_12844 | Not Available | Positive | 6591405 - 6591962 | 20844.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

