Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10267 | Not Available | Negative | 668239 - 669102 | 29810.8 |
| hypothetical protein | SAMN04487898_10268 | Not Available | Positive | 669156 - 669764 | 22693.4 |
| ssu ribosomal protein s10p | SAMN04487898_10269 | Not Available | Negative | 669836 - 670141 | 11418.2 |
| elongation factor g | SAMN04487898_10270 | Not Available | Negative | 670202 - 672316 | 77813.0 |
| small subunit ribosomal protein s7 | SAMN04487898_10271 | Not Available | Negative | 672334 - 672801 | 17603.6 |
| ssu ribosomal protein s12p | SAMN04487898_10272 | Not Available | Negative | 672818 - 673231 | 15095.5 |
| lipid a 3-o-deacylase (pagl) | SAMN04487898_10273 | Not Available | Negative | 673400 - 674524 | 41803.7 |
| uncharacterized conserved protein | SAMN04487898_10274 | Not Available | Negative | 674555 - 674776 | 8634.55 |
| hypothetical protein | SAMN04487898_10275 | Not Available | Positive | 674892 - 675527 | 23699.5 |
| aminopeptidase n | SAMN04487898_10276 | Not Available | Negative | 675766 - 677733 | 73577.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

