Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12825 | Not Available | Negative | 6573478 - 6574053 | 21444.6 |
| hypothetical protein | SAMN04487898_12826 | Not Available | Negative | 6574104 - 6574502 | 15372.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_12827 | Not Available | Negative | 6574639 - 6575235 | 22193.2 |
| hypothetical protein | SAMN04487898_12828 | Not Available | Positive | 6575408 - 6576274 | 32209.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12829 | Not Available | Positive | 6576349 - 6576780 | 17050.2 |
| hypothetical protein | SAMN04487898_12830 | Not Available | Positive | 6576770 - 6577390 | 24458.3 |
| hypothetical protein | SAMN04487898_12831 | Not Available | Negative | 6577393 - 6578646 | 45408.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12832 | Not Available | Negative | 6578643 - 6579233 | 23007.8 |
| protein of unknown function | SAMN04487898_12833 | Not Available | Negative | 6579381 - 6580094 | 25845.0 |
| phosphoribosyl-atp pyrophosphohydrolase | SAMN04487898_12834 | Not Available | Positive | 6580366 - 6580830 | 17574.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

