Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative holliday junction resolvase | SAMN04487898_12815 | Not Available | Positive | 6563766 - 6564218 | 17247.1 |
| predicted o-methyltransferase yrrm | SAMN04487898_12816 | Not Available | Positive | 6564215 - 6564850 | 24016.0 |
| flagellum-specific peptidoglycan hydrolase flgj | SAMN04487898_12817 | Not Available | Positive | 6564854 - 6565531 | 25675.5 |
| flagellum-specific peptidoglycan hydrolase flgj | SAMN04487898_12818 | Not Available | Positive | 6565531 - 6566442 | 34355.9 |
| hypothetical protein | SAMN04487898_12819 | Not Available | Positive | 6566491 - 6567243 | 28770.8 |
| protein of unknown function | SAMN04487898_12820 | Not Available | Positive | 6567629 - 6568687 | 40320.1 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN04487898_12821 | Not Available | Positive | 6568771 - 6570105 | 49085.9 |
| magnesium chelatase family protein | SAMN04487898_12822 | Not Available | Positive | 6570180 - 6571718 | 56171.8 |
| hypothetical protein | SAMN04487898_12823 | Not Available | Negative | 6571715 - 6571984 | 10229.6 |
| hypothetical protein | SAMN04487898_12824 | Not Available | Negative | 6572018 - 6573451 | 53856.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

