Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_12737 | Not Available | Negative | 6530134 - 6531282 | 42816.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12738 | Not Available | Negative | 6531405 - 6531974 | 22156.6 |
| glyoxalase-like domain-containing protein | SAMN04487898_12739 | Not Available | Positive | 6532196 - 6532654 | 16885.3 |
| hypothetical protein | SAMN04487898_12740 | Not Available | Negative | 6532775 - 6535153 | 93218.8 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04487898_12741 | Not Available | Negative | 6535192 - 6539679 | 154868.0 |
| hypothetical protein | SAMN04487898_12742 | Not Available | Negative | 6540385 - 6540654 | 10657.7 |
| Trna-arg | Not Available | Not Available | Positive | 6541631 - 6541702 | Not Available |
| hypothetical protein | SAMN04487898_1282 | Not Available | Positive | 6542016 - 6542327 | 11174.5 |
| methionyl-trna synthetase | SAMN04487898_1283 | Not Available | Negative | 6542435 - 6544543 | 79846.1 |
| muramoyltetrapeptide carboxypeptidase | SAMN04487898_1284 | Not Available | Positive | 6544584 - 6545489 | 33176.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

