Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12727 | Not Available | Negative | 6512745 - 6513341 | 22711.5 |
| starch-binding associating with outer membrane | SAMN04487898_12728 | Not Available | Negative | 6513558 - 6515081 | 57644.5 |
| iron complex outermembrane recepter protein | SAMN04487898_12729 | Not Available | Negative | 6515127 - 6518429 | 120764.0 |
| fecr family protein | SAMN04487898_12730 | Not Available | Negative | 6518572 - 6519531 | 37230.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12731 | Not Available | Negative | 6519628 - 6520260 | 24967.3 |
| protein of unknown function (du1801) | SAMN04487898_12732 | Not Available | Positive | 6520415 - 6520786 | 14745.1 |
| fad dependent oxidoreductase | SAMN04487898_12733 | Not Available | Negative | 6520842 - 6522878 | 75753.9 |
| hypothetical protein | SAMN04487898_12734 | Not Available | Negative | 6522889 - 6524928 | 75574.8 |
| starch-binding associating with outer membrane | SAMN04487898_12735 | Not Available | Negative | 6524928 - 6526529 | 60403.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12736 | Not Available | Negative | 6526540 - 6529992 | 127001.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

