Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_12717 | Not Available | Negative | 6496321 - 6497499 | 43413.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN04487898_12718 | Not Available | Negative | 6497548 - 6498192 | 24991.0 |
| imidazolonepropionase | SAMN04487898_12719 | Not Available | Negative | 6498351 - 6499619 | 47117.7 |
| abc-2 type transport system permease protein | SAMN04487898_12720 | Not Available | Negative | 6499619 - 6501907 | 86557.4 |
| abc-2 type transport system atp-binding protein | SAMN04487898_12721 | Not Available | Negative | 6501910 - 6502839 | 34115.4 |
| peroxiredoxin | SAMN04487898_12722 | Not Available | Negative | 6502900 - 6504000 | 40171.3 |
| protein of unknown function | SAMN04487898_12723 | Not Available | Negative | 6504012 - 6506573 | 96133.3 |
| susd family protein | SAMN04487898_12724 | Not Available | Negative | 6506577 - 6507992 | 52350.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12725 | Not Available | Negative | 6508004 - 6511321 | 121734.0 |
| fecr family protein | SAMN04487898_12726 | Not Available | Negative | 6511438 - 6512655 | 44998.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

