Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | SAMN04487898_1277 | Not Available | Negative | 6481157 - 6482422 | 46471.9 |
| galactonate dehydratase | SAMN04487898_1278 | Not Available | Negative | 6482447 - 6483613 | 43569.3 |
| l-ascorbate 6-phosphate lactonase | SAMN04487898_1279 | Not Available | Negative | 6483625 - 6484335 | 26486.4 |
| dna-binding transcriptional regulator, gntr family | SAMN04487898_12710 | Not Available | Negative | 6484519 - 6485199 | 25996.3 |
| protein of unknown function | SAMN04487898_12711 | Not Available | Negative | 6485362 - 6487905 | 94470.6 |
| peroxiredoxin | SAMN04487898_12712 | Not Available | Negative | 6487956 - 6488846 | 33428.8 |
| pkd-like family protein | SAMN04487898_12713 | Not Available | Negative | 6488880 - 6490361 | 54271.1 |
| protein of unknown function | SAMN04487898_12714 | Not Available | Negative | 6490392 - 6491162 | 28596.3 |
| starch-binding associating with outer membrane | SAMN04487898_12715 | Not Available | Negative | 6491171 - 6492682 | 57147.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12716 | Not Available | Negative | 6492686 - 6496102 | 127204.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

