Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hslj | SAMN04487898_12672 | Not Available | Positive | 6469126 - 6469815 | 25856.0 |
| dna-binding transcriptional regulator, marr family | SAMN04487898_12673 | Not Available | Positive | 6469966 - 6470448 | 18660.7 |
| fr47-like protein | SAMN04487898_12674 | Not Available | Positive | 6470432 - 6471115 | 25103.6 |
| hypothetical protein | SAMN04487898_12675 | Not Available | Positive | 6471194 - 6471787 | 23133.5 |
| mannose-6-phosphate isomerase, type 2 | SAMN04487898_12676 | Not Available | Positive | 6471845 - 6472342 | 18989.3 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN04487898_12677 | Not Available | Positive | 6472409 - 6473140 | 29517.8 |
| rna-directed dna polymerase | SAMN04487898_1272 | Not Available | Negative | 6473400 - 6474725 | 51229.6 |
| starch-binding associating with outer membrane | SAMN04487898_1274 | Not Available | Negative | 6475185 - 6477041 | 68016.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_1275 | Not Available | Negative | 6477061 - 6480216 | 115307.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04487898_1276 | Not Available | Negative | 6480392 - 6481144 | 26663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

