Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12662 | Not Available | Positive | 6458937 - 6459389 | 16931.6 |
| hypothetical protein | SAMN04487898_12663 | Not Available | Positive | 6459420 - 6460733 | 48060.1 |
| response regulator receiver domain-containing protein | SAMN04487898_12664 | Not Available | Positive | 6460841 - 6461203 | 13639.4 |
| transcriptional regulator, deor family | SAMN04487898_12665 | Not Available | Negative | 6461228 - 6461992 | 27900.1 |
| polyol permease family | SAMN04487898_12666 | Not Available | Positive | 6462282 - 6463580 | 47487.7 |
| d-3-phosphoglycerate dehydrogenase | SAMN04487898_12667 | Not Available | Positive | 6463637 - 6464596 | 35683.8 |
| autoinducer 2 (ai-2) kinase | SAMN04487898_12668 | Not Available | Positive | 6464616 - 6466064 | 53878.9 |
| sugar (pentulose or hexulose) kinase | SAMN04487898_12669 | Not Available | Positive | 6466066 - 6467523 | 52943.9 |
| alpha-ribazole phosphatase | SAMN04487898_12670 | Not Available | Positive | 6467516 - 6468115 | 22047.2 |
| glycerophosphoryl diester phosphodiesterase | SAMN04487898_12671 | Not Available | Positive | 6468133 - 6469029 | 33696.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

