Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l29 | SAMN04487898_10257 | Not Available | Negative | 663034 - 663243 | 7753.3 |
| large subunit ribosomal protein l16 | SAMN04487898_10258 | Not Available | Negative | 663316 - 663738 | 15954.9 |
| ssu ribosomal protein s3p | SAMN04487898_10259 | Not Available | Negative | 663777 - 664631 | 30727.1 |
| large subunit ribosomal protein l22 | SAMN04487898_10260 | Not Available | Negative | 664637 - 664999 | 13731.9 |
| small subunit ribosomal protein s19 | SAMN04487898_10261 | Not Available | Negative | 665007 - 665273 | 10003.1 |
| lsu ribosomal protein l2p | SAMN04487898_10262 | Not Available | Negative | 665273 - 666097 | 29843.2 |
| large subunit ribosomal protein l23 | SAMN04487898_10263 | Not Available | Negative | 666121 - 666411 | 10646.2 |
| lsu ribosomal protein l4p | SAMN04487898_10264 | Not Available | Negative | 666413 - 667042 | 23108.9 |
| large subunit ribosomal protein l3 | SAMN04487898_10265 | Not Available | Negative | 667047 - 667664 | 21841.4 |
| uncharacterized membrane protein | SAMN04487898_10266 | Not Available | Negative | 667847 - 668242 | 14354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

