Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l33 | SAMN04487898_12642 | Not Available | Negative | 6435999 - 6436181 | 6984.71 |
| large subunit ribosomal protein l28 | SAMN04487898_12643 | Not Available | Negative | 6436223 - 6436456 | 8872.97 |
| fecr family protein | SAMN04487898_12644 | Not Available | Positive | 6436874 - 6438166 | 47794.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12645 | Not Available | Positive | 6438166 - 6441459 | 122910.0 |
| susd family protein | SAMN04487898_12646 | Not Available | Positive | 6441472 - 6442839 | 51929.8 |
| hypothetical protein | SAMN04487898_12647 | Not Available | Negative | 6442884 - 6443192 | 10801.7 |
| methylamine utilisation protein maue | SAMN04487898_12648 | Not Available | Negative | 6443277 - 6443732 | 16886.5 |
| arac-type dna-binding protein | SAMN04487898_12649 | Not Available | Negative | 6443834 - 6444790 | 36700.7 |
| acetyl-coa synthetase | SAMN04487898_12650 | Not Available | Positive | 6444960 - 6446858 | 70526.4 |
| predicted zn-dependent peptidase | SAMN04487898_12651 | Not Available | Negative | 6446934 - 6449867 | 109861.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

