Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein | SAMN04487898_12632 | Not Available | Positive | 6426340 - 6427143 | 29631.0 |
| chromosome partitioning protein, parb family | SAMN04487898_12633 | Not Available | Positive | 6427154 - 6428080 | 34818.9 |
| hypothetical protein | SAMN04487898_12634 | Not Available | Positive | 6428080 - 6428700 | 22819.8 |
| dihydrodipicolinate reductase | SAMN04487898_12635 | Not Available | Positive | 6428724 - 6429464 | 27507.7 |
| signal peptidase i | SAMN04487898_12636 | Not Available | Positive | 6429471 - 6430670 | 46071.2 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN04487898_12637 | Not Available | Negative | 6430667 - 6431752 | 38905.7 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN04487898_12638 | Not Available | Negative | 6431758 - 6433344 | 60804.8 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN04487898_12639 | Not Available | Negative | 6433391 - 6434725 | 50437.4 |
| fused signal recognition particle receptor | SAMN04487898_12640 | Not Available | Negative | 6434768 - 6435730 | 34858.1 |
| protein of unknown function | SAMN04487898_12641 | Not Available | Negative | 6435803 - 6435958 | 5610.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

