Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine55 synthase | SAMN04487898_12612 | Not Available | Negative | 6400392 - 6401114 | 27049.5 |
| undecaprenyl-diphosphatase | SAMN04487898_12613 | Not Available | Negative | 6401114 - 6401908 | 29470.1 |
| protein of unknown function | SAMN04487898_12614 | Not Available | Negative | 6401918 - 6402142 | 8174.42 |
| cell division transport system permease protein | SAMN04487898_12615 | Not Available | Negative | 6402142 - 6403020 | 32422.5 |
| hypothetical protein | SAMN04487898_12616 | Not Available | Positive | 6403280 - 6403687 | 14923.8 |
| h+/cl-antiporter clca | SAMN04487898_12617 | Not Available | Positive | 6403810 - 6405066 | 45045.3 |
| leucyl-trna synthetase | SAMN04487898_12618 | Not Available | Positive | 6405146 - 6407965 | 108018.0 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN04487898_12619 | Not Available | Negative | 6408040 - 6409035 | 38491.8 |
| hypothetical protein | SAMN04487898_12620 | Not Available | Negative | 6409456 - 6409734 | 10919.1 |
| hypothetical protein | SAMN04487898_12621 | Not Available | Positive | 6410381 - 6410881 | 18985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

