Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb superfamily protein | SAMN04487898_12571 | Not Available | Negative | 6381557 - 6382069 | 19354.3 |
| transcriptional regulator of competence genes, tfox/sxy family | SAMN04487898_12572 | Not Available | Positive | 6382724 - 6383071 | 13451.4 |
| glycosyl hydrolase family 76 | SAMN04487898_12573 | Not Available | Negative | 6383240 - 6384316 | 41192.5 |
| hypothetical protein | SAMN04487898_12574 | Not Available | Negative | 6384316 - 6384507 | 7359.13 |
| small-conductance mechanosensitive channel | SAMN04487898_12575 | Not Available | Positive | 6384598 - 6386958 | 89314.5 |
| hypothetical protein | SAMN04487898_12576 | Not Available | Positive | 6387015 - 6387257 | 8891.59 |
| hypothetical protein | SAMN04487898_12577 | Not Available | Negative | 6387462 - 6387635 | 6412.59 |
| nad(p)h-dependent fmn reductase | SAMN04487898_12578 | Not Available | Positive | 6387825 - 6388373 | 20445.5 |
| hypothetical protein | SAMN04487898_12579 | Not Available | Positive | 6388415 - 6388669 | 9997.56 |
| segregation and condensation protein b | SAMN04487898_12580 | Not Available | Positive | 6388635 - 6388862 | 8898.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

