Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | SAMN04487898_12561 | Not Available | Negative | 6372402 - 6375011 | 97950.9 |
| coproporphyrinogen oxidase | SAMN04487898_12562 | Not Available | Negative | 6375141 - 6376037 | 34307.6 |
| hypothetical protein | SAMN04487898_12563 | Not Available | Negative | 6376227 - 6376427 | 6903.54 |
| hypothetical protein | SAMN04487898_12564 | Not Available | Negative | 6376493 - 6376798 | 11489.5 |
| protein of unknown function | SAMN04487898_12565 | Not Available | Positive | 6376879 - 6377364 | 18557.7 |
| putative dna-binding domain-containing protein | SAMN04487898_12566 | Not Available | Positive | 6377384 - 6378007 | 23532.4 |
| multidrug resistance protein, mate family | SAMN04487898_12567 | Not Available | Positive | 6378107 - 6379492 | 50197.1 |
| hypothetical protein | SAMN04487898_12568 | Not Available | Positive | 6379624 - 6380562 | 33412.8 |
| hypothetical protein | SAMN04487898_12569 | Not Available | Negative | 6380672 - 6380848 | 6657.02 |
| protein of unknown function | SAMN04487898_12570 | Not Available | Negative | 6380885 - 6381466 | 22327.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

