Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12551 | Not Available | Negative | 6361185 - 6362201 | 38818.6 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN04487898_12552 | Not Available | Negative | 6362201 - 6362833 | 24754.9 |
| wbqc-like protein family protein | SAMN04487898_12553 | Not Available | Positive | 6363001 - 6363732 | 29287.9 |
| magnesium transporter | SAMN04487898_12554 | Not Available | Positive | 6363736 - 6364854 | 43469.8 |
| magnesium transporter | SAMN04487898_12555 | Not Available | Positive | 6364882 - 6366231 | 49895.8 |
| biotin synthase | SAMN04487898_12556 | Not Available | Positive | 6366244 - 6367254 | 37361.9 |
| peroxiredoxin, ohr subfamily | SAMN04487898_12557 | Not Available | Negative | 6367251 - 6367661 | 14418.9 |
| tigr01666 family membrane protein | SAMN04487898_12558 | Not Available | Negative | 6367719 - 6369878 | 82358.7 |
| hypothetical protein | SAMN04487898_12559 | Not Available | Negative | 6370052 - 6371209 | 43785.2 |
| tetratricopeptide repeat-containing protein | SAMN04487898_12560 | Not Available | Negative | 6371286 - 6372362 | 40060.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

