Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcystin-dependent protein | SAMN04487898_12531 | Not Available | Positive | 6334038 - 6334595 | 19157.8 |
| hypothetical protein | SAMN04487898_12532 | Not Available | Positive | 6334623 - 6337846 | 108791.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04487898_12533 | Not Available | Positive | 6339293 - 6340924 | 56371.8 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_12534 | Not Available | Positive | 6340987 - 6341871 | 32204.6 |
| glutathione peroxidase | SAMN04487898_12535 | Not Available | Positive | 6341952 - 6342464 | 19268.3 |
| 5'-nucleotidase, c-terminal domain | SAMN04487898_12536 | Not Available | Positive | 6342569 - 6343327 | 27794.7 |
| 5'-nucleotidase | SAMN04487898_12537 | Not Available | Positive | 6343305 - 6344252 | 34491.5 |
| pp_05142 | SAMN04487898_12538 | Not Available | Negative | 6344257 - 6345348 | Not Available |
| starch-binding associating with outer membrane | SAMN04487898_12539 | Not Available | Negative | 6345512 - 6347203 | 63593.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12540 | Not Available | Negative | 6347221 - 6350358 | 115388.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

