Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l30 | SAMN04487898_10247 | Not Available | Negative | 659051 - 659230 | 6607.36 |
| ssu ribosomal protein s5p | SAMN04487898_10248 | Not Available | Negative | 659235 - 659753 | 18024.1 |
| large subunit ribosomal protein l18 | SAMN04487898_10249 | Not Available | Negative | 659772 - 660125 | 12630.2 |
| large subunit ribosomal protein l6 | SAMN04487898_10250 | Not Available | Negative | 660131 - 660688 | 20076.4 |
| small subunit ribosomal protein s8 | SAMN04487898_10251 | Not Available | Negative | 660707 - 661105 | 14615.1 |
| small subunit ribosomal protein s14 | SAMN04487898_10252 | Not Available | Negative | 661221 - 661490 | 10046.5 |
| large subunit ribosomal protein l5 | SAMN04487898_10253 | Not Available | Negative | 661490 - 662056 | 21190.0 |
| large subunit ribosomal protein l24 | SAMN04487898_10254 | Not Available | Negative | 662056 - 662394 | 11859.8 |
| lsu ribosomal protein l14p | SAMN04487898_10255 | Not Available | Negative | 662396 - 662764 | 13364.4 |
| small subunit ribosomal protein s17 | SAMN04487898_10256 | Not Available | Negative | 662766 - 663020 | 9784.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

