Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12521 | Not Available | Positive | 6326701 - 6326985 | 11056.2 |
| abc-type multidrug transport system, atpase component | SAMN04487898_12522 | Not Available | Positive | 6326982 - 6327671 | 25973.0 |
| protein n-acetyltransferase, rimj/riml family | SAMN04487898_12523 | Not Available | Positive | 6327692 - 6328249 | 21467.9 |
| aspartyl/asparaginyl beta-hydroxylase | SAMN04487898_12524 | Not Available | Positive | 6328264 - 6328956 | 26265.9 |
| hypothetical protein | SAMN04487898_12525 | Not Available | Positive | 6328953 - 6329897 | 36018.2 |
| hypothetical protein | SAMN04487898_12526 | Not Available | Negative | 6329877 - 6330146 | 10216.4 |
| phytanoyl-coa dioxygenase (phyh) | SAMN04487898_12527 | Not Available | Positive | 6330470 - 6331423 | 37197.2 |
| adenylylsulfate kinase | SAMN04487898_12528 | Not Available | Positive | 6331423 - 6331947 | 19642.0 |
| 5'-nucleotidase | SAMN04487898_12529 | Not Available | Negative | 6331891 - 6332874 | 35541.0 |
| methionyl-trna formyltransferase | SAMN04487898_12530 | Not Available | Positive | 6333052 - 6334032 | 35882.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

