Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12458 | Not Available | Negative | 6286464 - 6287060 | 23204.9 |
| atp-binding cassette protein, chvd family | SAMN04487898_12459 | Not Available | Positive | 6287254 - 6288933 | 62708.6 |
| hypothetical protein | SAMN04487898_12460 | Not Available | Positive | 6289124 - 6289390 | 9121.93 |
| hypothetical protein | SAMN04487898_12461 | Not Available | Negative | 6289451 - 6292096 | 99926.5 |
| glpgli family protein | SAMN04487898_12462 | Not Available | Negative | 6292101 - 6292880 | 29214.5 |
| s-formylglutathione hydrolase frmb | SAMN04487898_12463 | Not Available | Negative | 6293043 - 6293828 | 29779.6 |
| glucokinase | SAMN04487898_12464 | Not Available | Negative | 6293864 - 6294736 | 31738.8 |
| hypothetical protein | SAMN04487898_12465 | Not Available | Negative | 6294818 - 6295042 | 8683.44 |
| cbs domain-containing protein | SAMN04487898_12466 | Not Available | Negative | 6295523 - 6296059 | 20309.7 |
| hypothetical protein | SAMN04487898_12467 | Not Available | Negative | 6296156 - 6298758 | 84490.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

