Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis lipoprotein | SAMN04487898_12448 | Not Available | Negative | 6270863 - 6271867 | 36913.0 |
| predicted dehydrogenase | SAMN04487898_12449 | Not Available | Negative | 6271869 - 6273188 | 49178.2 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04487898_12450 | Not Available | Negative | 6273231 - 6274196 | 36438.9 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN04487898_12451 | Not Available | Negative | 6274409 - 6276952 | 94788.5 |
| fad dependent oxidoreductase | SAMN04487898_12452 | Not Available | Negative | 6277323 - 6278969 | 61617.5 |
| lysophospholipase l1 | SAMN04487898_12453 | Not Available | Negative | 6278969 - 6279751 | 28973.2 |
| hypothetical protein | SAMN04487898_12454 | Not Available | Negative | 6279769 - 6280260 | 17213.0 |
| starch-binding associating with outer membrane | SAMN04487898_12455 | Not Available | Negative | 6280273 - 6281679 | 52412.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12456 | Not Available | Negative | 6281691 - 6285092 | 123422.0 |
| fecr family protein | SAMN04487898_12457 | Not Available | Negative | 6285214 - 6286404 | 44692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

