Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12438 | Not Available | Negative | 6256640 - 6257485 | 31797.6 |
| collagen triple helix repeat-containing protein | SAMN04487898_12439 | Not Available | Negative | 6257612 - 6260989 | 110815.0 |
| hypothetical protein | SAMN04487898_12440 | Not Available | Negative | 6261007 - 6262929 | 65376.9 |
| hypothetical protein | SAMN04487898_12441 | Not Available | Negative | 6262931 - 6264070 | 41352.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04487898_12442 | Not Available | Negative | 6264108 - 6264602 | 18028.2 |
| signal transduction histidine kinase | SAMN04487898_12443 | Not Available | Negative | 6264710 - 6266845 | 80772.8 |
| two component transcriptional regulator, lyttr family | SAMN04487898_12444 | Not Available | Negative | 6266852 - 6267562 | 26859.8 |
| helix-turn-helix domain-containing protein | SAMN04487898_12445 | Not Available | Negative | 6267648 - 6268442 | 30616.8 |
| carboxypepd_reg-like domain-containing protein | SAMN04487898_12446 | Not Available | Positive | 6268532 - 6269767 | 47271.1 |
| dna repair photolyase | SAMN04487898_12447 | Not Available | Positive | 6269815 - 6270888 | 40650.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

