Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN04487898_12428 | Not Available | Positive | 6245141 - 6247627 | 90443.8 |
| beta-barrel assembly machine subunit bamd | SAMN04487898_12429 | Not Available | Positive | 6247806 - 6248735 | 35688.5 |
| rna polymerase rpb6 | SAMN04487898_12430 | Not Available | Positive | 6248737 - 6249063 | 12661.8 |
| phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase | SAMN04487898_12431 | Not Available | Positive | 6249108 - 6250307 | 42716.1 |
| protein of unknown function | SAMN04487898_12432 | Not Available | Positive | 6250304 - 6251209 | 34607.1 |
| predicted transcriptional regulator | SAMN04487898_12433 | Not Available | Positive | 6251309 - 6251692 | 14343.3 |
| blar1 peptidase m56 | SAMN04487898_12434 | Not Available | Positive | 6251696 - 6253321 | 61317.2 |
| dna repair protein recn (recombination protein n) | SAMN04487898_12435 | Not Available | Positive | 6253260 - 6255080 | 67956.8 |
| enoyl-[acyl-carrier-protein] reductase | SAMN04487898_12436 | Not Available | Positive | 6255141 - 6255959 | 29708.6 |
| hypothetical protein | SAMN04487898_12437 | Not Available | Negative | 6256028 - 6256594 | 20393.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

