Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12418 | Not Available | Negative | 6225234 - 6226850 | 57859.3 |
| starch-binding associating with outer membrane | SAMN04487898_12419 | Not Available | Negative | 6226834 - 6228678 | 69029.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12420 | Not Available | Negative | 6228696 - 6231935 | 119059.0 |
| signal transduction histidine kinase | SAMN04487898_12421 | Not Available | Negative | 6232210 - 6236592 | 166247.0 |
| hypothetical protein | SAMN04487898_12422 | Not Available | Negative | 6236732 - 6236932 | 7651.49 |
| peroxiredoxin | SAMN04487898_12423 | Not Available | Negative | 6237021 - 6238175 | 43224.6 |
| susd family protein | SAMN04487898_12424 | Not Available | Negative | 6238191 - 6239540 | 49806.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12425 | Not Available | Negative | 6239582 - 6242830 | 117349.0 |
| fecr family protein | SAMN04487898_12426 | Not Available | Negative | 6243162 - 6244316 | 43137.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12427 | Not Available | Negative | 6244400 - 6244990 | 22999.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

