Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | SAMN04487898_12366 | Not Available | Negative | 6176325 - 6177215 | 33486.2 |
| atp synthase f1 subcomplex epsilon subunit | SAMN04487898_12367 | Not Available | Negative | 6177738 - 6177980 | 8486.49 |
| atp synthase f1 subcomplex beta subunit | SAMN04487898_12368 | Not Available | Negative | 6178046 - 6179551 | 54327.1 |
| dtdp-4-dehydrorhamnose reductase | SAMN04487898_12369 | Not Available | Positive | 6179769 - 6180674 | 33638.4 |
| peroxiredoxin | SAMN04487898_12370 | Not Available | Positive | 6180850 - 6181314 | 17131.4 |
| Trna-arg | Not Available | Not Available | Positive | 6181414 - 6181487 | Not Available |
| recombinase | SAMN04487898_12372 | Not Available | Negative | 6181847 - 6183490 | 63990.9 |
| hypothetical protein | SAMN04487898_12373 | Not Available | Positive | 6183725 - 6184543 | 32619.7 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04487898_12374 | Not Available | Positive | 6184617 - 6186530 | 72744.1 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN04487898_12375 | Not Available | Positive | 6186701 - 6188278 | 61067.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

