Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-citramalate synthase | SAMN04487898_12356 | Not Available | Negative | 6163826 - 6165319 | 55205.9 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN04487898_12357 | Not Available | Negative | 6165370 - 6165966 | 22297.3 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04487898_12358 | Not Available | Negative | 6165984 - 6167399 | 50561.4 |
| 2-isopropylmalate synthase | SAMN04487898_12359 | Not Available | Negative | 6167442 - 6168605 | 42609.9 |
| molybdate transport system atp-binding protein | SAMN04487898_12360 | Not Available | Negative | 6168622 - 6170130 | 56324.8 |
| ketol-acid reductoisomerase | SAMN04487898_12361 | Not Available | Negative | 6170188 - 6171669 | 53851.0 |
| dinb superfamily protein | SAMN04487898_12362 | Not Available | Negative | 6171710 - 6172177 | 17757.1 |
| acetolactate synthase, small subunit | SAMN04487898_12363 | Not Available | Negative | 6172187 - 6172804 | 24043.7 |
| acetolactate synthase, large subunit | SAMN04487898_12364 | Not Available | Negative | 6172814 - 6174631 | 66043.7 |
| dihydroxy-acid dehydratase | SAMN04487898_12365 | Not Available | Negative | 6174591 - 6176288 | 59734.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

