Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04487898_12336 | Not Available | Positive | 6144791 - 6145657 | 32456.7 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN04487898_12337 | Not Available | Positive | 6145660 - 6146364 | 27368.4 |
| hypothetical protein | SAMN04487898_12338 | Not Available | Positive | 6146364 - 6146879 | 19539.7 |
| uroporphyrinogen decarboxylase | SAMN04487898_12339 | Not Available | Positive | 6146903 - 6147925 | 37976.4 |
| putative membrane protein | SAMN04487898_12340 | Not Available | Positive | 6147933 - 6148481 | 21432.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12341 | Not Available | Positive | 6148597 - 6149163 | 21842.4 |
| hypothetical protein | SAMN04487898_12342 | Not Available | Positive | 6149153 - 6149839 | 25750.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04487898_12343 | Not Available | Positive | 6149850 - 6150653 | 30671.9 |
| abc-type fe3+/spermidine/putrescine transport systems, atpase components | SAMN04487898_12344 | Not Available | Positive | 6150711 - 6151703 | 36594.2 |
| carboxypepd_reg-like domain-containing protein | SAMN04487898_12345 | Not Available | Positive | 6151864 - 6154434 | 98606.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

