Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12326 | Not Available | Negative | 6134492 - 6135508 | 38450.8 |
| transcriptional regulator, tetr family | SAMN04487898_12327 | Not Available | Positive | 6135698 - 6136288 | 22601.4 |
| hypothetical protein | SAMN04487898_12328 | Not Available | Positive | 6136329 - 6136553 | 8784.79 |
| predicted arabinose efflux permease, mfs family | SAMN04487898_12329 | Not Available | Positive | 6136586 - 6137818 | 44508.5 |
| hypothetical protein | SAMN04487898_12330 | Not Available | Positive | 6137889 - 6138533 | 24521.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487898_12331 | Not Available | Negative | 6138508 - 6139350 | 31511.3 |
| glutamyl-trna reductase | SAMN04487898_12332 | Not Available | Positive | 6139524 - 6140750 | 46735.9 |
| hydroxymethylbilane synthase | SAMN04487898_12333 | Not Available | Positive | 6140776 - 6142353 | 58889.8 |
| porphobilinogen synthase | SAMN04487898_12334 | Not Available | Positive | 6142366 - 6143334 | 35804.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04487898_12335 | Not Available | Positive | 6143382 - 6144755 | 49868.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

