Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04487898_12316 | Not Available | Negative | 6125438 - 6126322 | 33526.3 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04487898_12317 | Not Available | Negative | 6126335 - 6127087 | 28280.2 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04487898_12318 | Not Available | Negative | 6127084 - 6127818 | 26146.7 |
| short-chain dehydrogenase | SAMN04487898_12319 | Not Available | Positive | 6127999 - 6128688 | 25054.1 |
| phage shock protein c (pspc) family protein | SAMN04487898_12320 | Not Available | Positive | 6128710 - 6129444 | 27747.9 |
| hypothetical protein | SAMN04487898_12321 | Not Available | Positive | 6129447 - 6130388 | 35004.1 |
| uncharacterized membrane protein yckc, rdd family | SAMN04487898_12322 | Not Available | Positive | 6130432 - 6131049 | 23500.1 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04487898_12323 | Not Available | Positive | 6131081 - 6133090 | 74445.6 |
| pas fold-containing protein | SAMN04487898_12324 | Not Available | Negative | 6133087 - 6133851 | 29510.5 |
| hypothetical protein | SAMN04487898_12325 | Not Available | Negative | 6134073 - 6134363 | 11015.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

