Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase-4 subunit b | SAMN04487898_1236 | Not Available | Positive | 6104584 - 6106485 | 72047.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04487898_1237 | Not Available | Positive | 6106607 - 6108724 | 80521.2 |
| membrane protein | SAMN04487898_1238 | Not Available | Negative | 6108727 - 6109752 | 37036.2 |
| outer membrane protein assembly factor bama | SAMN04487898_1239 | Not Available | Negative | 6109754 - 6112105 | 88549.7 |
| autotransporter translocation and assembly factor tamb | SAMN04487898_12310 | Not Available | Negative | 6112089 - 6117131 | 186150.0 |
| topoisomerase-4 subunit a | SAMN04487898_12311 | Not Available | Positive | 6117475 - 6120666 | 118267.0 |
| hypothetical protein | SAMN04487898_12312 | Not Available | Negative | 6120673 - 6123000 | 89739.6 |
| hupe / urej protein | SAMN04487898_12313 | Not Available | Negative | 6123024 - 6123611 | 22148.8 |
| hypothetical protein | SAMN04487898_12314 | Not Available | Positive | 6123678 - 6124154 | 18502.2 |
| hypothetical protein | SAMN04487898_12315 | Not Available | Negative | 6124314 - 6125372 | 39541.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

